HMMER is a tool used to search for specific sequences in biological applications.
This example is a basic biosequencing simulation using HMMER on Rescale.
|Simulation Code||HMMER 3.1b1|
|Analysis Type||Biosequence analysis|
|Description||A DNA sequence is searched against a database for exact and near matches.|
|Suggested Hardware||Marble / 1 core|
hmmbuild MADE1.hmm MADE1.sto; nhmmer MADE1.hmm dna_target.fa > MADE1.out
|Estimated Run Time||5 minutes|